About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides20427NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides2042826S PROTESOME SUBUNIT 6
Paelopatides20429REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides20430TRANSPOSON
Paelopatides20431-
Paelopatides20432PDF RECEPTOR-LIKE PROTEIN-RELATED
Paelopatides20433SERINE-THREONINE PROTEIN KINASE
Paelopatides20436ZINC FINGER PROTEIN
Paelopatides20438NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides20439-
Paelopatides20440INHIBITOR OF APOPTOSIS
Paelopatides20441-
Paelopatides20442GCIP-INTERACTING PROTEIN P29
Paelopatides20443PROTEIN CBG26694
Paelopatides20444PROTEIN CBG26694
Paelopatides20446HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides20447-
Paelopatides20448-
Paelopatides20449SI:CH211-262H13.3-RELATED-RELATED
Paelopatides20450ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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