About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21633-
Paelopatides21634-
Paelopatides21635-
Paelopatides21636F5/8 TYPE C DOMAIN-CONTAINING PROTEIN
Paelopatides21639-
Paelopatides21640-
Paelopatides21641ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21642GAG-RELATED PROTEIN
Paelopatides21643REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21644-
Paelopatides21645EXS-RELATED PROTEIN
Paelopatides21646-
Paelopatides21647SI:CH211-196P9.1-RELATED
Paelopatides21648ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21649REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21650-
Paelopatides21651BLR7054 PROTEIN
Paelopatides21652-
Paelopatides21653CARBONYL REDUCTASE 1-RELATED
Paelopatides21654CARBONYL REDUCTASE 1-RELATED
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