About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21610NETRIN RECEPTOR UNC5
Paelopatides21611-
Paelopatides21612PROTEIN CBG26694
Paelopatides21613SERINE/THREONINE-PROTEIN KINASE PLK
Paelopatides21614-
Paelopatides21615C2H2-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides21616GAG-RELATED PROTEIN
Paelopatides21617-
Paelopatides21618-
Paelopatides21619-
Paelopatides21620-
Paelopatides21621COILED-COIL DOMAIN-CONTAINING PROTEIN 60
Paelopatides21622-
Paelopatides21623ACTIN FILAMENT-ASSOCIATED PROTEIN 1 FAMILY MEMBER
Paelopatides21624ACROSIN-RELATED
Paelopatides21625TRANSMEMBRANE PROTEASE SERINE
Paelopatides21626ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21627ARYLSULFATASE FAMILY MEMBER
Paelopatides21628FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides21629ZGC:195170
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