About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21784CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides21785B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides21786REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21787ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21788ENDONUCLEASE-RELATED
Paelopatides21789FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides21790REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21791EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN
Paelopatides21792EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN
Paelopatides2179352 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides21794-
Paelopatides21795REVERSE TRANSCRIPTASES
Paelopatides21796PROTEIN CBG26694
Paelopatides21797-
Paelopatides21798RIBOSOME MATURATION PROTEIN SBDS
Paelopatides21799-
Paelopatides21800NUCLEAR RECEPTOR CO-REPRESSOR RELATED NCOR
Paelopatides21801ENDONUCLEASE-RELATED
Paelopatides21802PROTEIN CBG26694
Paelopatides21803HEAT SHOCK PROTEIN 70KDA
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