About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21845FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides21846ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21847-
Paelopatides21848EPM2A-INTERACTING PROTEIN 1
Paelopatides21849ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides21850-
Paelopatides21851OS05G0310600 PROTEIN
Paelopatides21852-
Paelopatides21853-
Paelopatides21854TRANSPOSABLE ELEMENT-RELATED
Paelopatides21855DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides21856-
Paelopatides21857ENZYMATIC POLYPROTEIN-RELATED
Paelopatides21859-
Paelopatides21860PROTEIN CBG26694
Paelopatides21861NICE-3
Paelopatides21862-
Paelopatides21863ARYLACETAMIDE DEACETYLASE
Paelopatides21864PEROXISOMAL BIOGENESIS FACTOR 11
Paelopatides21865AGAP009604-PA
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