About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides21824AMINO ACID TRANSPORTER
Paelopatides21825TELOMERE-ASSOCIATED PROTEIN RIF1
Paelopatides21826TELOMERE-ASSOCIATED PROTEIN RIF1
Paelopatides21827PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides21828GH17980P-RELATED
Paelopatides21829N-ACETYLGALACTOSAMINYLTRANSFERASE
Paelopatides21830CADHERIN-23
Paelopatides21831PIKACHURIN-LIKE PROTEIN
Paelopatides21832REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides21833RETROTRANSPOSON
Paelopatides21834RETROTRANSPOSON
Paelopatides21835-
Paelopatides21836TRANSPOSON
Paelopatides21838POL PROTEIN
Paelopatides21839-
Paelopatides21840-
Paelopatides21841-
Paelopatides21842EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
Paelopatides21843-
Paelopatides21844FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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