About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides22273BUCENTAUR RELATED
Paelopatides22274-
Paelopatides22275-
Paelopatides22276-
Paelopatides22277REVERSE TRANSCRIPTASES
Paelopatides22278-
Paelopatides22279ASPARTYL/LYSYL-TRNA SYNTHETASE
Paelopatides22280C-TYPE LECTIN DOMAIN FAMILY 20 MEMBER A-RELATED
Paelopatides22281PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
Paelopatides22282-
Paelopatides22284CT120 PROTEIN
Paelopatides22285ENDONUCLEASE-RELATED
Paelopatides22286-
Paelopatides22287CT120 PROTEIN
Paelopatides22288TRANSPOSON
Paelopatides22289VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
Paelopatides22290VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN
Paelopatides22291-
Paelopatides22292-
Paelopatides22293NETRIN RECEPTOR UNC5
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