About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides22355-
Paelopatides22356UNCHARACTERIZED
Paelopatides22357PROMININ PROM PROTEIN
Paelopatides22358REVERSE TRANSCRIPTASES
Paelopatides22359PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN
Paelopatides22360-
Paelopatides22361UNCHARACTERIZED
Paelopatides22362ENZYMATIC POLYPROTEIN-RELATED
Paelopatides22363ENDONUCLEASE-RELATED
Paelopatides22364PROTEIN CBG26694
Paelopatides22365-
Paelopatides22366-
Paelopatides22367UNCHARACTERIZED
Paelopatides22368-
Paelopatides22369PROTEIN CBG26694
Paelopatides22370-
Paelopatides22371REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides22372-
Paelopatides22373-
Paelopatides22374IONOTROPIC GLUTAMATE RECEPTOR
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