About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23279BUCENTAUR RELATED
Paelopatides23280-
Paelopatides23281BONUS, ISOFORM C-RELATED
Paelopatides23282BONUS, ISOFORM C-RELATED
Paelopatides23285ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides23286DNA HELICASE RECQ FAMILY MEMBER
Paelopatides23287FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides23288REVERSE TRANSCRIPTASES
Paelopatides23289ENZYMATIC POLYPROTEIN-RELATED
Paelopatides23290ENDONUCLEASE-RELATED
Paelopatides23291-
Paelopatides23293EPM2A-INTERACTING PROTEIN 1
Paelopatides23294-
Paelopatides23295-
Paelopatides23296ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides23297SI:CH211-108C17.2-RELATED-RELATED
Paelopatides23298-
Paelopatides23299PROTEIN CBG26694
Paelopatides23300LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1
Paelopatides23301LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1
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