About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23323REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides23324NEUROTRANSMITTER GATED ION CHANNEL
Paelopatides23325-
Paelopatides23326SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Paelopatides23327PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides23328POL PROTEIN
Paelopatides23329-
Paelopatides23330-
Paelopatides23331-
Paelopatides23332SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides23333SOLUTE CARRIER FAMILY 22 MEMBER
Paelopatides23334-
Paelopatides23335-
Paelopatides23336PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides23337DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Paelopatides23338-
Paelopatides23339-
Paelopatides23340SOLUTE CARRIER FAMILY 5
Paelopatides23341REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides23342BCL-2 RELATED
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