About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23716BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
Paelopatides23717MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B
Paelopatides23718-
Paelopatides2371952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides23720REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides23721-
Paelopatides23722TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS
Paelopatides23723TRANSCRIPTIONAL ACTIVATOR CUBITUS INTERRUPTUS
Paelopatides23724ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED
Paelopatides23725FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides23726-
Paelopatides23727-
Paelopatides23728GAG-RELATED PROTEIN
Paelopatides23729-
Paelopatides23730-
Paelopatides23731OLIGORIBONUCLEASE, MITOCHONDRIAL
Paelopatides23732GABA-B RECEPTOR
Paelopatides23733-
Paelopatides23734HOMEOBOX PROTEIN ARISTALESS
Paelopatides23735TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
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