About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23736PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides23737SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED
Paelopatides23738REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides23739TRANSLATION ELONGATION FACTOR G-RELATED
Paelopatides23740PROTEIN CBG26694
Paelopatides23741ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides23742ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides23743PROTEIN CBG26694
Paelopatides23744PROTEIN CBG26694
Paelopatides23745REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides23746-
Paelopatides23747-
Paelopatides23748F5/8 TYPE C DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides23749-
Paelopatides23750-
Paelopatides23752CARBOXYLESTERASE
Paelopatides23753POL PROTEIN
Paelopatides23754ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides23755RIBOSOMAL PROTEIN S6 KINASE
Paelopatides23756-
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