About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides23757G DOMAIN-CONTAINING PROTEIN
Paelopatides23758-
Paelopatides23759ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides23760-
Paelopatides23761G DOMAIN-CONTAINING PROTEIN
Paelopatides23762MYOTUBULARIN-RELATED
Paelopatides23763ENDONUCLEASE-RELATED
Paelopatides23764ENZYMATIC POLYPROTEIN-RELATED
Paelopatides23765-
Paelopatides23766-
Paelopatides23767REVERSE TRANSCRIPTASES
Paelopatides23768G DOMAIN-CONTAINING PROTEIN
Paelopatides23769-
Paelopatides23770-
Paelopatides23771RCG26366
Paelopatides23772FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides23773PROTEIN CBG26694
Paelopatides23774-
Paelopatides23775REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides23776GAG-RELATED PROTEIN
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