About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24482-
Paelopatides24483ENDONUCLEASE
Paelopatides24484ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides24485REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24486-
Paelopatides24487FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides24488FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides24489AGAP008810-PA
Paelopatides24490FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides24491NUCLEOLAR PROTEIN OF 40 KDA
Paelopatides24492-
Paelopatides24493CONTACTIN 5
Paelopatides24494B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides24495ACYL-COA DEHYDROGENASE
Paelopatides24496ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides24497ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides24499EPM2A-INTERACTING PROTEIN 1
Paelopatides24500ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides24501GAG-RELATED PROTEIN
Paelopatides24502PROTEIN CBG26694
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