About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24526-
Paelopatides24528-
Paelopatides24529-
Paelopatides24530UNCHARACTERIZED
Paelopatides24531INTRAFLAGELLAR TRANSPORT PROTEIN 43 HOMOLOG
Paelopatides24532F-BOX ONLY PROTEIN
Paelopatides24533LATROPHILIN RECEPTOR-LIKE PROTEIN A
Paelopatides24534MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 18
Paelopatides24535LIPOATE-PROTEIN LIGASE
Paelopatides24536-
Paelopatides24542PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides24543REVERSE TRANSCRIPTASE
Paelopatides24544PROTEIN CBG26694
Paelopatides24545NETRIN RECEPTOR UNC5
Paelopatides24546NETRIN RECEPTOR UNC5
Paelopatides24548ENZYMATIC POLYPROTEIN-RELATED
Paelopatides24549ENDONUCLEASE-RELATED
Paelopatides24550-
Paelopatides24551-
Paelopatides24552-
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