The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Paelopatides sp. Yap | Echinodermata | Paelopatides sp. Yap | Deep sea | 6,633 | Yap Trench at 8°1′22"N; 137°50′41"E | - |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
- | 3.7Gb | Contig | 2020 | - | Fujian Agriculture and Forestry University | PRJCA003789 | 89.40% | 57,522 |
Title | Journal | Pubmed ID |
---|---|---|
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environments | iScience | 36444293 |
Gene ID | Description |
---|---|
Paelopatides60642 | |
Paelopatides60643 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides60644 | - |
Paelopatides60645 | |
Paelopatides60646 | ALPHA- 1,3 -FUCOSYLTRANSFERASE |
Paelopatides60647 | |
Paelopatides60648 | REVERSE TRANSCRIPTASES |
Paelopatides60650 | |
Paelopatides60651 | CARBOXYLESTERASE |
Paelopatides60652 | |
Paelopatides60653 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60654 | |
Paelopatides60655 | GLUTAMYL-TRNA GLN AMIDOTRANSFERASE SUBUNIT B MITOCHONDRIAL AND PROKARYOTIC PET112-RELATED |
Paelopatides60656 | BEIGE/BEACH-RELATED |
Paelopatides60657 | PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4 |
Paelopatides60658 | PROPERDIN |
Paelopatides60659 | |
Paelopatides60660 | |
Paelopatides60661 | 52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED |
Paelopatides60662 | WNT RELATED |
Paelopatides60663 | |
Paelopatides60664 | |
Paelopatides60665 | |
Paelopatides60666 | |
Paelopatides60667 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
Paelopatides60668 | |
Paelopatides60669 | ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED |
Paelopatides60670 | COMM DOMAIN CONTAINING PROTEIN 2 |
Paelopatides60671 | ALMS1-RELATED |
Paelopatides60672 | RIBOSOMAL PROTEIN L2 |
Paelopatides60673 | RIBOSOMAL PROTEIN L2 |
Paelopatides60674 | ADHESION G-PROTEIN COUPLED RECEPTOR |
Paelopatides60675 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides60676 | TYROSINE-PROTEIN KINASE |
Paelopatides60677 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides60678 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides60679 | CXC DOMAIN-CONTAINING PROTEIN-RELATED |
Paelopatides60680 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |
Paelopatides60681 | NETRIN RECEPTOR UNC5 |
Paelopatides60682 | |
Paelopatides60683 | PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60684 | MIP11318P |
Paelopatides60685 | |
Paelopatides60686 | RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED |
Paelopatides60687 | PROTEIN CBG26694 |
Paelopatides60688 | RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED |
Paelopatides60689 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60690 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
Paelopatides60691 | |
Paelopatides60692 | ANOSMIN |