About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24503PROTEIN CBG26694
Paelopatides24504REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24505-
Paelopatides24506-
Paelopatides24508-
Paelopatides24509SIALATE O-ACETYLESTERASE
Paelopatides24510TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides24511REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24512REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24513REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24514RIBOSOMAL PROTEIN L7AE FAMILY MEMBER
Paelopatides24515TYROSINE-PROTEIN KINASE
Paelopatides24516CYTOCHROME P450 FAMILY 46 SUBFAMILY A
Paelopatides24518REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24519-
Paelopatides24520EXPRESSED PROTEIN
Paelopatides24521-
Paelopatides24522NETRIN RECEPTOR UNC5
Paelopatides24524UBIQUITIN
Paelopatides24525UBIQUITIN
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