About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24782-
Paelopatides24783DUF3504 DOMAIN-CONTAINING PROTEIN
Paelopatides24784-
Paelopatides24785-
Paelopatides24786-
Paelopatides24788UNCHARACTERIZED
Paelopatides24789PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides24790-
Paelopatides24791-
Paelopatides24792-
Paelopatides24793-
Paelopatides24795TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Paelopatides24796TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides24797-
Paelopatides24798L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides24799BONUS, ISOFORM C-RELATED
Paelopatides24800-
Paelopatides24801-
Paelopatides24802RETROTRANSPOSON
Paelopatides24803PHD-TYPE DOMAIN-CONTAINING PROTEIN
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