About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24825MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Paelopatides24826-
Paelopatides24827TYROSINE-PROTEIN KINASE RECEPTOR
Paelopatides24828-
Paelopatides24829ORGANIC ANION TRANSPORTER
Paelopatides24830ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides24831TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides24832-
Paelopatides24833MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Paelopatides24834-
Paelopatides24835REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24836ACROSIN-RELATED
Paelopatides24837PROTEIN, PUTATIVE-RELATED
Paelopatides24838ACROSIN-RELATED
Paelopatides24839ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides24840ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides24841FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides24842REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24843FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides24844ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
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