About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides24804V-TYPE PROTON ATPASE SUBUNIT B
Paelopatides24805TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides24806ENDONUCLEASE-RELATED
Paelopatides24807REVERSE TRANSCRIPTASES
Paelopatides24808REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides24809BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Paelopatides24810-
Paelopatides24811-
Paelopatides24812FI04643P-RELATED
Paelopatides24813-
Paelopatides24814-
Paelopatides24815ALDO/KETO REDUCTASE
Paelopatides24817HISTONE H2B
Paelopatides24818HISTONE H4
Paelopatides24819HISTONE H3
Paelopatides24820SI:CH211-196P9.1-RELATED
Paelopatides24821POL PROTEIN
Paelopatides24822ENDONUCLEASE-RELATED
Paelopatides24823ENDONUCLEASE-RELATED
Paelopatides24824TYROSINE-PROTEIN KINASE RECEPTOR
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