About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25323GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
Paelopatides25324-
Paelopatides25325-
Paelopatides25326TRANSLOCATION ASSOCIATED MEMBRANE PROTEIN
Paelopatides25327-
Paelopatides25328TITIN
Paelopatides25329SAM DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides25330PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides25331-
Paelopatides25332MATING RESPONSE PROTEIN POI2
Paelopatides25333-
Paelopatides25334-
Paelopatides25335-
Paelopatides25336-
Paelopatides25337GTP-BINDING
Paelopatides25338SPHINGOMYELINASE FAMILY MEMBER
Paelopatides25339-
Paelopatides2534026S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13
Paelopatides2534126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13
Paelopatides25342-
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