About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25385-
Paelopatides25386-
Paelopatides25387FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides25388SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides25389IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
Paelopatides25390SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides25391PROTEIN CBG26694
Paelopatides25392PROTEIN CBG26694
Paelopatides2539352 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED
Paelopatides25394-
Paelopatides25395ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides25396-
Paelopatides25397EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA
Paelopatides25398VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL
Paelopatides25399VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL
Paelopatides25400PROTEIN CBG26694
Paelopatides25401BONUS, ISOFORM C-RELATED
Paelopatides25402PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides25403-
Paelopatides25404-
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