About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25452-
Paelopatides25453PROTEIN CBG26694
Paelopatides25454PROTEIN CBG26694
Paelopatides25455-
Paelopatides25456-
Paelopatides25457GAG-RELATED PROTEIN
Paelopatides25458-
Paelopatides25459CARBOHYDRATE SULFOTRANSFERASE 15
Paelopatides25465-
Paelopatides25466-
Paelopatides25467FILAMIN/GPBP-INTERACTING PROTEIN
Paelopatides25468-
Paelopatides25469ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides25470PROTEIN CBG26694
Paelopatides25471PROTEIN CBG26694
Paelopatides25472-
Paelopatides2547439A RIBOSOMAL PROTEIN L50, MITOCHONDRIAL
Paelopatides25477VERTNIN
Paelopatides25478ENZYMATIC POLYPROTEIN-RELATED
Paelopatides25479-
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