About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25343SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Paelopatides25344STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Paelopatides25345PROTEIN CBG26694
Paelopatides25346PROTEIN CBG26694
Paelopatides25347CYTOCHROME P450 508A4-RELATED
Paelopatides25348CYTOCHROME P450 508A4-RELATED
Paelopatides25349HMG DOMAIN-CONTAINING PROTEIN 3
Paelopatides25350PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides25351-
Paelopatides25352TRANSPOSON
Paelopatides25353ZINC FINGER PROTEIN
Paelopatides25355MOLYBDOPTERIN BIOSYNTHESIS PROTEIN
Paelopatides25356MOLYBDOPTERIN BIOSYNTHESIS PROTEIN
Paelopatides25357NHL REPEAT-CONTAINING PROTEIN-RELATED
Paelopatides25358-
Paelopatides25359-
Paelopatides25360-
Paelopatides25361-
Paelopatides25362FI04643P-RELATED
Paelopatides25363FI04643P-RELATED
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