About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25530DNA REPAIR PROTEIN RAD9
Paelopatides25531-
Paelopatides25532PROTEIN PHOSPHATASE 2C
Paelopatides25533-
Paelopatides25534EPM2A-INTERACTING PROTEIN 1
Paelopatides25535-
Paelopatides25536PROTEIN CBG26694
Paelopatides25537DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2
Paelopatides25538REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides25539DIABLO HOMOLOG, MITOCHONDRIAL
Paelopatides25540-
Paelopatides25541PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides25544-
Paelopatides25545-
Paelopatides25546LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED
Paelopatides25547LARGE SUBUNIT GTPASE 1 HOMOLOG-RELATED
Paelopatides25548DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE
Paelopatides25549SER/THR-PROTEIN KINASE RIO2
Paelopatides25550-
Paelopatides25551-
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