About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25502-
Paelopatides25503STEREOCILIN RELATED
Paelopatides25504VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Paelopatides25506HUEL-CATION TRANSPORTER
Paelopatides25507HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides25508HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides25509GLUTAMYL-TRNA GLN AMIDOTRANSFERASE SUBUNIT B MITOCHONDRIAL AND PROKARYOTIC PET112-RELATED
Paelopatides25510-
Paelopatides25511-
Paelopatides25512PROTEIN CBG26694
Paelopatides25513-
Paelopatides25514ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides25515-
Paelopatides25523PEPTIDASE
Paelopatides25524-
Paelopatides25525DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Paelopatides25526POL PROTEIN
Paelopatides25527-
Paelopatides25528TRANSPOSON
Paelopatides25529DNA REPAIR PROTEIN RAD9
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