About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides2548040S RIBOSOMAL PROTEIN S15A
Paelopatides25481MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM22
Paelopatides25482ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides25483-
Paelopatides25484ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides25485-
Paelopatides25486HSC70CB, ISOFORM G-RELATED
Paelopatides25487LIPOYL SYNTHASE
Paelopatides25488HISTONE PARYLATION FACTOR 1
Paelopatides25489L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+))
Paelopatides25490-
Paelopatides25491ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides25492NETRIN RECEPTOR UNC5
Paelopatides25494TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides25495PARANEOPLASTIC ANTIGEN
Paelopatides25496ADP-RIBOSYLGLYCOHYDROLASE
Paelopatides25497-
Paelopatides25498ZGC:195170
Paelopatides25500BUCENTAUR RELATED
Paelopatides25501-
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