About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25552PROTEIN CBG26694
Paelopatides25553PROTEIN CBG26694
Paelopatides25554PROTEIN CBG26694
Paelopatides25555FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides25556PROTEIN CBG26694
Paelopatides25557PROTEIN CBG26694
Paelopatides25558PROTEIN CBG26694
Paelopatides25559ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides25560-
Paelopatides25561-
Paelopatides25562EXPRESSED PROTEIN
Paelopatides25563-
Paelopatides25564HEAT SHOCK PROTEIN 70KDA
Paelopatides25565-
Paelopatides25566SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT
Paelopatides25567-
Paelopatides25568NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides25569INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides25570ENDONUCLEASE-RELATED
Paelopatides25575-
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