About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25622CARBOHYDRATE SULFOTRANSFERASE 15
Paelopatides25623PROTEIN CEBPZOS
Paelopatides25624LEUCINE-RICH PPR MOTIF-CONTAINING PROTEIN, MITOCHONDRIAL
Paelopatides25625-
Paelopatides25626RE60986P
Paelopatides25627RE60986P
Paelopatides25628PROTEIN CBG26694
Paelopatides25629PARANEOPLASTIC ANTIGEN
Paelopatides25630INOSITOL POLYPHOSPHATE KINASE
Paelopatides25631-
Paelopatides25632-
Paelopatides25633REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides25634CARBOHYDRATE SULFOTRANSFERASE 15
Paelopatides25635REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides25636-
Paelopatides25637LD33804P
Paelopatides25638PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides25639-
Paelopatides25640BRCA1-ASSOCIATED PROTEIN
Paelopatides25645CXXC-TYPE ZINC FINGER PROTEIN 1
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