About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25912REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides25913-
Paelopatides25914PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides25915TRANSPOSABLE ELEMENT-RELATED
Paelopatides25917OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
Paelopatides25918-
Paelopatides25919SI:CH211-196P9.1-RELATED
Paelopatides25920ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides25922-
Paelopatides25923UNCHARACTERIZED
Paelopatides25924REVERSE TRANSCRIPTASES
Paelopatides25925REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides25926GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides25927CYTOKINESIS PROTEIN 3
Paelopatides25928BLR2807 PROTEIN
Paelopatides25929-
Paelopatides25930ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides25931FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides25932FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides25933PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-LIKE 4
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