About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides25983PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides25984PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides25985FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides25986SI:CH211-108C17.2-RELATED-RELATED
Paelopatides25987ZGC:195170
Paelopatides25988PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides25989RETROTRANSPOSON
Paelopatides25990-
Paelopatides25994PATCHED-RELATED
Paelopatides25995PATCHED-RELATED
Paelopatides25996PATCHED-RELATED
Paelopatides25997RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESS
Paelopatides25998-
Paelopatides25999RECOMBINING BINDING PROTEIN SUPPRESSOR OF HAIRLESS
Paelopatides26000-
Paelopatides26001PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides26002CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26003CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26004-
Paelopatides26005-
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