About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26006CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 19
Paelopatides26007SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26008-
Paelopatides26009-
Paelopatides26010-
Paelopatides26015PARANEOPLASTIC ANTIGEN
Paelopatides26017ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides26018PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides26019-
Paelopatides26020-
Paelopatides26021-
Paelopatides26022CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26023REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides26024PARANEOPLASTIC ANTIGEN
Paelopatides26025TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides26026ENDONUCLEASE-RELATED
Paelopatides26027BUCENTAUR RELATED
Paelopatides26028REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides26029-
Paelopatides26030INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER
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