About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26750-
Paelopatides26751-
Paelopatides26752-
Paelopatides26753GUANYLATE BINDING PROTEIN
Paelopatides26754PROLINE OXIDASE
Paelopatides26755PROLINE OXIDASE
Paelopatides26756SI:CH211-196P9.1-RELATED
Paelopatides26757-
Paelopatides26759ALPHA-GLUCOSIDASE
Paelopatides26760-
Paelopatides26762ACROSIN-RELATED
Paelopatides26764CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26765ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides26766ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides26767-
Paelopatides26770FER-1-LIKE
Paelopatides26771GENERAL TRANSCRIPTION FACTOR II-I REPEAT DOMAIN-CONTAINING PROTEIN 2
Paelopatides26776ZGC:195170
Paelopatides26777DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Paelopatides26778DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
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