About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26779REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides26780PEPTIDASE
Paelopatides26781REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides26782IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX
Paelopatides26783-
Paelopatides26784-
Paelopatides2678560S RIBOSOMAL PROTEIN L11-RELATED
Paelopatides26786TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides26787REVERSE TRANSCRIPTASES
Paelopatides26788REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides26789ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides26790-
Paelopatides26792SAM (S-ADENOSYL METHIONINE) TRANSPORTER
Paelopatides26793-
Paelopatides26794SI:CH211-108C17.2-RELATED-RELATED
Paelopatides26795-
Paelopatides26796ENZYMATIC POLYPROTEIN-RELATED
Paelopatides26797-
Paelopatides26798PROTEIN CBG26694
Paelopatides26799B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
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