About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26822SURFACE ANTIGEN BSPA-LIKE-RELATED
Paelopatides26823PROTEIN C20ORF43 HOMOLOG
Paelopatides26824TRANSMEMBRANE PROTEIN 65
Paelopatides26825MITOGEN-ACTIVATED PROTEIN KINASE
Paelopatides26826TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides26827NEUROBLASTOMA-AMPLIFIED SEQUENCE
Paelopatides26828G PROTEIN-COUPLED RECEPTOR-RELATED
Paelopatides26829ENZYMATIC POLYPROTEIN-RELATED
Paelopatides26830ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26831PROTEIN CBG26694
Paelopatides26832-
Paelopatides26833-
Paelopatides26834HISTONE H2A
Paelopatides26835HISTONE H3
Paelopatides26836FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides26837ENDONUCLEASE
Paelopatides26838FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides26839ENDONUCLEASE-RELATED
Paelopatides26840ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides26841-
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