About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26935THAP DOMAIN-CONTAINING
Paelopatides26936BROMO ADJACENT HOMOLOGY DOMAIN-CONTAINING 1 PROTEIN
Paelopatides26937REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides26938SET DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides26939NXPE FAMILY MEMBER
Paelopatides26941INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides26942-
Paelopatides26943RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Paelopatides26944ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides26945-
Paelopatides26946SERINE/ARGININE REPETITIVE MATRIX PROTEIN 5-RELATED
Paelopatides26947ENZYMATIC POLYPROTEIN-RELATED
Paelopatides26948-
Paelopatides26949ZGC:195170
Paelopatides26950-
Paelopatides26951EXPRESSED PROTEIN
Paelopatides26952-
Paelopatides26953-
Paelopatides26954CYTOTOXIC AND REGULATORY T-CELL MOLECULE
Paelopatides26955-
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