About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides26891UNCHARACTERIZED
Paelopatides26892-
Paelopatides26893SRCR DOMAIN-CONTAINING PROTEIN
Paelopatides26894PROTEIN CBG26694
Paelopatides26896-
Paelopatides26897FAS-ASSOCIATED PROTEIN
Paelopatides26898-
Paelopatides26899-
Paelopatides26900-
Paelopatides26901INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER
Paelopatides26902UNCHARACTERIZED
Paelopatides26903TECTONIC FAMILY MEMBER
Paelopatides26904-
Paelopatides26905-
Paelopatides26906SI:CH211-171H4.7-RELATED
Paelopatides26907-
Paelopatides26908GUANYLATE BINDING PROTEIN
Paelopatides26909-
Paelopatides26910-
Paelopatides26911ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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