About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides2726339S RIBOSOMAL PROTEIN L52, MITOCHONDRIAL
Paelopatides27264CHRONIC MYELOGENOUS LEUKEMIA TUMOR ANTIGEN 66
Paelopatides27265-
Paelopatides27266-
Paelopatides27267PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides27268RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN
Paelopatides27269SERINE/THREONINE-PROTEIN KINASE PIM
Paelopatides27270NUCLEOTIDE KINASE
Paelopatides27271TUBULIN
Paelopatides27272-
Paelopatides27273-
Paelopatides27274PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides27278-
Paelopatides27279-
Paelopatides27280-
Paelopatides27281FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides27282FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides27283FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides27284SPHINGOMYELIN PHOSPHODIESTERASE 4
Paelopatides27285RIBONUCLEIC ACID BINDING PROTEIN S1
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