About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27307-
Paelopatides27308-
Paelopatides27310MYND-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides27311MULTI-COPPER OXIDASE
Paelopatides27312SI:CH211-161H7.5-RELATED
Paelopatides27313REVERSE TRANSCRIPTASES
Paelopatides27314REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27315-
Paelopatides27317-
Paelopatides27318-
Paelopatides27319ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides27320PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides27321ALPHA-2,8-SIALYLTRANSFERASE
Paelopatides27322PROTEIN CBG26694
Paelopatides27326ADAM A DISINTEGRIN AND METALLOPROTEASE DOMAIN
Paelopatides27327PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides27328ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides27329SI:CH211-108C17.2-RELATED-RELATED
Paelopatides27330SI:CH211-108C17.2-RELATED-RELATED
Paelopatides27331-
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