About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27332-
Paelopatides27333REGULATOR OF G-PROTEIN SIGNALING 3
Paelopatides27334-
Paelopatides27335-
Paelopatides27336COILED-COIL DOMAIN-CONTAINING PROTEIN 151
Paelopatides27337-
Paelopatides27338TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides27339COILED-COIL DOMAIN-CONTAINING PROTEIN 97
Paelopatides27340DNA-DIRECTED RNA POLYMERASE
Paelopatides27341-
Paelopatides27342FORMIN HOMOLOGY 2 FAMILY MEMBER
Paelopatides27343FORMIN HOMOLOGY 2 FAMILY MEMBER
Paelopatides27344FORMIN HOMOLOGY 2 FAMILY MEMBER
Paelopatides27345UNCHARACTERIZED
Paelopatides27346KINESIN-RELATED
Paelopatides27347NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides27349NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED
Paelopatides27350-
Paelopatides27351LEUCOKININ RECEPTOR-RELATED
Paelopatides27352CYTOCHROME P450 508A4-RELATED
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