About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27286PROTEIN CBG05131
Paelopatides27287PRE-MRNA PROCESSING PROTEIN PRP39-RELATED
Paelopatides27288B9 DOMAIN-CONTAINING
Paelopatides27289B9 DOMAIN-CONTAINING
Paelopatides27290DNA REPAIR PROTEIN RAD51 HOMOLOG 4
Paelopatides27291PTD012 PROTEIN
Paelopatides27292-
Paelopatides27293-
Paelopatides27294TNF RECEPTOR ASSOCIATED FACTOR
Paelopatides27295LIM DOMAIN-CONTAINING PROTEIN
Paelopatides27296-
Paelopatides27297PDZ AND LIM DOMAIN PROTEIN ZASP
Paelopatides27298-
Paelopatides27300-
Paelopatides27301-
Paelopatides27302-
Paelopatides27303PROTEIN CBG26694
Paelopatides27304-
Paelopatides27305ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Paelopatides27306UNCHARACTERIZED
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