About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27374-
Paelopatides27375-
Paelopatides27376-
Paelopatides27377-
Paelopatides27378HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Paelopatides27379-
Paelopatides27380GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides27381-
Paelopatides27382FIVE-SPAN TRANSMEMBRANE PROTEIN M83
Paelopatides27383WD40 REPEAT PROTEIN 12, 37
Paelopatides27384ACROSIN-RELATED
Paelopatides27385-
Paelopatides27386NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides27387-
Paelopatides27388EPM2A-INTERACTING PROTEIN 1
Paelopatides27389-
Paelopatides27390ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides27391-
Paelopatides27392METABOTROPIC GLUTAMATE RECEPTOR
Paelopatides27393ENDONUCLEASE-RELATED
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