About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27394ENZYMATIC POLYPROTEIN-RELATED
Paelopatides27395PARANEOPLASTIC ANTIGEN
Paelopatides27396-
Paelopatides27397REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27398-
Paelopatides27399REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27400BUCENTAUR RELATED
Paelopatides27401REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27402REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27403-
Paelopatides27404PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides27405EPM2A-INTERACTING PROTEIN 1
Paelopatides27406DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Paelopatides27407INACTIVE TYROSINE-PROTEIN KINASE 7
Paelopatides27408PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides27409-
Paelopatides27410RAS-RELATED PROTEIN RAB
Paelopatides27411HEART DEVELOPMENT PROTEIN WITH EGF-LIKE DOMAINS 1
Paelopatides27412-
Paelopatides27414SRCR DOMAIN-CONTAINING PROTEIN
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