About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27415-
Paelopatides27416S -2-HYDROXY-ACID OXIDASE-RELATED
Paelopatides27417ACETYL-COENZYME A SYNTHETASE
Paelopatides27418REVERSE TRANSCRIPTASES
Paelopatides27419ACETYL-COENZYME A SYNTHETASE
Paelopatides27420-
Paelopatides27421PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides27422ADIPOR/PROGESTIN RECEPTOR-RELATED
Paelopatides27423S -2-HYDROXY-ACID OXIDASE-RELATED
Paelopatides27424-
Paelopatides27425TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides27426FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides27427-
Paelopatides27428-
Paelopatides27429-
Paelopatides27430ALDEHYDE DEHYDROGENASE
Paelopatides27431REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27432-
Paelopatides27433REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27434-
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