About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27455CARNITINE O-ACYLTRANSFERASE
Paelopatides27456ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides27457ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides27458POL PROTEIN
Paelopatides27459NETRIN RECEPTOR UNC5
Paelopatides27460-
Paelopatides27461GEO13361P1-RELATED
Paelopatides27462RBM25 PROTEIN
Paelopatides27463AXIN INTERACTOR, DORSALIZATION-ASSOCIATED PROTEIN
Paelopatides27464-
Paelopatides27465NACHT DOMAIN-CONTAINING PROTEIN
Paelopatides27466-
Paelopatides27467-
Paelopatides27468-
Paelopatides27469-
Paelopatides27470PROTEIN CBG26694
Paelopatides27471PROTEIN CBG26694
Paelopatides27472REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27473BUCENTAUR RELATED
Paelopatides27474-
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