About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27544EPM2A-INTERACTING PROTEIN 1
Paelopatides27545EMILIN ELASTIN MICROFIBRIL INTERFACE-LOCATED PROTEIN ELASTIN MICROFIBRIL INTERFACER
Paelopatides27546MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Paelopatides27547-
Paelopatides27548MACROGLOBULIN / COMPLEMENT
Paelopatides27549RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
Paelopatides27550PROTEIN DR1
Paelopatides27551-
Paelopatides27552-
Paelopatides27553-
Paelopatides27554-
Paelopatides27555ENOYL-COA HYDRATASE
Paelopatides27556-
Paelopatides27557CYTOCHROME P450 FAMILY 4
Paelopatides27558CYTOCHROME P450 FAMILY 4
Paelopatides27559GLYCOSYLTRANSFERASE
Paelopatides27560GLUCOSE-6-PHOSPHATE EXCHANGER SLC37A4
Paelopatides27561REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27562ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides27563-
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