About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27604TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides27605PHD-TYPE DOMAIN-CONTAINING PROTEIN
Paelopatides27606BETA-CAROTENE DIOXYGENASE
Paelopatides27607-
Paelopatides27608L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides27609REVERSE TRANSCRIPTASES
Paelopatides27610TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides27611CYTOCHROME P450 FAMILY 46 SUBFAMILY A
Paelopatides27612CYTOCHROME P450 FAMILY 46 SUBFAMILY A
Paelopatides27613PROTEIN CBG26694
Paelopatides27614-
Paelopatides27615FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides27616AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Paelopatides27617FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides27618CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides27619-
Paelopatides27620CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides27621CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides27622-
Paelopatides27623-
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