About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27584PROTEIN CBG03580
Paelopatides27585-
Paelopatides27586RAD52 MOTIF-CONTAINING PROTEIN 1
Paelopatides27587PROTEIN CBG26694
Paelopatides27588MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED
Paelopatides27589PHOSPHOMANNOMUTASE 45A
Paelopatides27590-
Paelopatides27591UNCHARACTERIZED
Paelopatides27592-
Paelopatides27593-
Paelopatides27594-
Paelopatides27595-
Paelopatides27596ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides27597ENZYMATIC POLYPROTEIN-RELATED
Paelopatides27598PROTEIN CBG26694
Paelopatides27599ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides27600-
Paelopatides27601BUCENTAUR RELATED
Paelopatides27602IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
Paelopatides27603MYND-TYPE DOMAIN-CONTAINING PROTEIN
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