About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27624GEO11136P1-RELATED
Paelopatides27625TRANSPOSON TY3-I GAG-POL POLYPROTEIN
Paelopatides27626PARANEOPLASTIC ANTIGEN
Paelopatides27627-
Paelopatides27628GEO11136P1-RELATED
Paelopatides27629FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides27630-
Paelopatides27631PROTEIN CBG26694
Paelopatides27632-
Paelopatides27633L1 TRANSPOSABLE ELEMENT-RELATED
Paelopatides27634-
Paelopatides27635RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Paelopatides27636-
Paelopatides27637-
Paelopatides27638-
Paelopatides27639ENZYMATIC POLYPROTEIN-RELATED
Paelopatides27640PROTEIN CBG26694
Paelopatides27641ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATED
Paelopatides27642SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL
Paelopatides27643NUCLEAR HORMONE RECEPTOR
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