About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27755ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides27756REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27757TRANSCRIPTASE, PUTATIVE-RELATED-RELATED
Paelopatides27758DED DOMAIN-CONTAINING PROTEIN
Paelopatides27759DED DOMAIN-CONTAINING PROTEIN
Paelopatides27760REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27761ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides27762ASAP FAMILY MEMBER
Paelopatides27763ELONGATOR COMPLEX PROTEIN 2
Paelopatides27764-
Paelopatides27765F-BOX ONLY PROTEIN 33
Paelopatides27766-
Paelopatides27767MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B
Paelopatides27768-
Paelopatides27769INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER
Paelopatides27770-
Paelopatides27771-
Paelopatides27772UNCHARACTERIZED
Paelopatides27773CARBOXYLESTERASE
Paelopatides27774CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 54
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