About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides27733CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides27734CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides27735REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides27736CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides27737-
Paelopatides27738IGGFC_BINDING DOMAIN-CONTAINING PROTEIN
Paelopatides27739G_PROTEIN_RECEP_F2_4 DOMAIN-CONTAINING PROTEIN
Paelopatides27740FRAGILE X MENTAL RETARDATION SYNDROME-RELATED PROTEIN
Paelopatides27741CENTROSOMAL PROTEIN OF 19K CEP19
Paelopatides27742MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 4
Paelopatides27743PROTEASE M3 THIMET OLIGOPEPTIDASE-RELATED
Paelopatides27744-
Paelopatides27745-
Paelopatides27746-
Paelopatides27747-
Paelopatides27748-
Paelopatides27749-
Paelopatides27750PROTEIN CBG26694
Paelopatides27751SCAVENGER RECEPTOR DOMAIN-CONTAINING
Paelopatides27752REVERSE TRANSCRIPTASES
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